Nucleotide

Process nucleotide data.

Alignment

Perform sequencing alignment for a DNA sequencing experiment.

Endpoint

POST /processing/nucleotide/alignment

Parameters

Name	Type	Description	Required
manifest	string	GCS bucket path for GCS file path manifest	✔️

Response

Status: 200

{
  "task_identifier": "EFTGHDFER"
}

curl -X POST https://api.rvrnc.io/processing/nucleotide/alignment \
  --data '{
  "manifest": "gs://user/manifest.csv"
}'

Genotyping

Perform genotyping of a sample using next-generation DNA sequencing data.

Endpoint

POST /processing/nucleotide/genotyping

Parameters

Name	Type	Description	Required
manifest	string	GCS bucket path for GCS file path manifest	✔️

Response

Status: 200

{
  "task_identifier": "EFTGHDFER"
}

curl -X POST https://api.rvrnc.io/processing/nucleotide/genotyping \
  --data '{
  "manifest": "gs://user/manifest.csv"
}'

Screen Enrichment

gRNA enrichment across screen conditions in terms of one or more.

Endpoint

POST /processing/nucleotide/screen_enrichment

Parameters

Name	Type	Description	Required
manifest	string	GCS bucket path for GCS file path manifest	✔️

Response

Status: 200

{
  "task_identifier": "EFTGHDFER"
}

curl -X POST https://api.rvrnc.io/processing/nucleotide/screen_enrichment \
  --data '{
  "manifest": "gs://user/manifest.csv"
}'